Load R packages
library(rainy)
library(kableExtra)
library(patchwork)
Fit models
# Set initial parameter estimates
theta <- c(0.01, 1, 10, 0.1, 10)
names(theta) <- c("$\\lambda$ (1/h)", "$\\mu_X$ (mm)", "$\\beta$ (1/h)", "$\\gamma$ (1/h)", "$\\eta$ (1/h)")
# Use fitting property Set 1
x <- fitBL0(data = bremenStats, theta = theta, properties = "set1",
months = 1)
# Use fitting property Set 2
x6 <- fitBL0(data = bremenStats, theta = theta, properties = "set6",
months = 1)
Table 1
# Calculate estimates and confidence intervals
sex <- sqrt(diag(vcov(x)))
sex6 <- sqrt(diag(vcov(x6)))
coefCompare <- cbind(t(coef(x)), sex, confint(x), t(coef(x6)), sex6, confint(x6))
# Set parameter names
BL0pars <- c("$\\lambda$", "$\\mu_X$", "$\\beta$", "$\\gamma$", "$\\eta$")
rownames(coefCompare) <- BL0pars
colnames(coefCompare) <- rep(c("estimate", "SE", "lower", "upper"), 2)
# Produce the table
kableExtra::kbl(coefCompare, digits = 3, booktabs = FALSE, align = "c",
row.names = TRUE, escape = FALSE) %>%
kable_styling() %>%
add_header_above(c(" ", "Set 1" = 4, "Set 2" = 4))
|
Set 1
|
Set 2
|
|
estimate
|
SE
|
lower
|
upper
|
estimate
|
SE
|
lower
|
upper
|
\(\lambda\)
|
0.026
|
0.003
|
0.020
|
0.033
|
0.025
|
0.003
|
0.019
|
0.031
|
\(\mu_X\)
|
0.799
|
0.080
|
0.658
|
0.972
|
1.295
|
0.170
|
1.001
|
1.676
|
\(\beta\)
|
0.393
|
0.134
|
0.201
|
0.768
|
4.300
|
0.590
|
3.286
|
5.626
|
\(\gamma\)
|
0.092
|
0.024
|
0.055
|
0.153
|
0.233
|
0.023
|
0.192
|
0.282
|
\(\eta\)
|
1.408
|
0.137
|
1.164
|
1.704
|
8.202
|
0.585
|
7.131
|
9.433
|